Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rbm28Q8CGC6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rbm28Q8CGC6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rbm28Q8CGC6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rbm28Q8CGC6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Mir1247-201ENSMUST00000116706 82 ntBASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm45880-201ENSMUST00000213041 853 ntBASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm10146-201ENSMUST00000072739 309 ntBASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rbm28Q8CGC6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Gm13123-201ENSMUST00000122173 492 ntBASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rbm28Q8CGC6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rbm28Q8CGC6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm43179-201ENSMUST00000198797 275 ntBASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm44069-201ENSMUST00000204898 506 ntBASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Gm19309-201ENSMUST00000218295 205 ntBASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbm28Q8CGC6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms