Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm9229-201ENSMUST00000222777 126 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Gm15393-201ENSMUST00000120499 219 ntBASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Mir1897-201ENSMUST00000122581 272 ntBASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Gm44401-201ENSMUST00000204462 2375 ntBASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc28bQ8CEG5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.99□□□□□ -0.33
Ccdc28bQ8CEG5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms