Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc87Q8CDL9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc87Q8CDL9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc87Q8CDL9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.96□□□□□ -0.18
Ccdc87Q8CDL9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc87Q8CDL9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc87Q8CDL9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc87Q8CDL9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
Ccdc87Q8CDL9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms