Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcpip1Q8CDG3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcpip1Q8CDG3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms