Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Gm24548-201ENSMUST00000158650 108 ntBASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Matn2-206ENSMUST00000228570 2798 ntBASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ptcd1Q8C2E4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm10434-201ENSMUST00000101158 471 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm11637-201ENSMUST00000120601 592 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm12363-201ENSMUST00000122250 668 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm24514-201ENSMUST00000174961 285 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm4768-201ENSMUST00000206199 686 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Gm30285-201ENSMUST00000214614 422 ntBASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ptcd1Q8C2E4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Gm11439-201ENSMUST00000118598 409 ntBASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Gm14277-201ENSMUST00000121195 360 ntBASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ptcd1Q8C2E4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms