Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm6429-201ENSMUST00000117144 475 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm15385-201ENSMUST00000118725 667 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm8809-201ENSMUST00000119367 743 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm23773-201ENSMUST00000158985 296 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim35Q8C006 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm6555-201ENSMUST00000195167 789 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm38341-201ENSMUST00000195357 515 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm5309-201ENSMUST00000197416 677 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm20136-201ENSMUST00000207501 891 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm34664-202ENSMUST00000207661 1032 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm7594-201ENSMUST00000218595 871 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm5374-202ENSMUST00000222910 314 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Gm5715-201ENSMUST00000196854 1465 ntBASIC14.42□□□□□ -0.1
Trim35Q8C006 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim35Q8C006 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim35Q8C006 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm14701-201ENSMUST00000117156 348 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm24498-201ENSMUST00000158445 102 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm15795-201ENSMUST00000160969 553 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm5312-201ENSMUST00000203728 547 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm44919-201ENSMUST00000208587 1073 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm5339-201ENSMUST00000210551 1102 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm24623-201ENSMUST00000082616 194 ntBASIC14.41□□□□□ -0.1
Trim35Q8C006 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms