Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gm38158-201ENSMUST00000194617 339 ntBASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gm44364-201ENSMUST00000198368 141 ntBASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gm6334-201ENSMUST00000207083 228 ntBASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf2Q8BZT2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm12241-201ENSMUST00000118330 726 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm13786-201ENSMUST00000122371 333 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Gm9257-201ENSMUST00000221254 232 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Cts7-204ENSMUST00000225321 1257 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.3□□□□□ -0.28
Sh3rf2Q8BZT2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gm13350-201ENSMUST00000120519 479 ntBASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gm7584-201ENSMUST00000175829 940 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms