Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm15171-201ENSMUST00000122191 334 ntBASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm26736-201ENSMUST00000180425 1236 ntBASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Mir7221-201ENSMUST00000184009 72 ntBASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm10766-202ENSMUST00000194123 606 ntBASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm5779-201ENSMUST00000218467 910 ntBASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm24420-201ENSMUST00000176676 59 ntBASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm2756-201ENSMUST00000195851 400 ntBASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gm9229-201ENSMUST00000222777 126 ntBASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lsm11Q8BUV6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.27□□□□□ -0.6
Lsm11Q8BUV6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm11Q8BUV6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lsm11Q8BUV6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm11Q8BUV6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm11Q8BUV6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms