Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Srrm4Q8BKA3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Gm6152-201ENSMUST00000151704 340 ntBASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Gm8602-201ENSMUST00000184045 607 ntBASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Gm18187-201ENSMUST00000196476 984 ntBASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.41□□□□□ -0.58
Srrm4Q8BKA3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Gm8652-201ENSMUST00000181363 964 ntBASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Gm10012-201ENSMUST00000078252 192 ntBASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Srrm4Q8BKA3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms