Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.13□□□□□ -0.15
Nop53Q8BK35 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.13□□□□□ -0.15
Nop53Q8BK35 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nop53Q8BK35 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.12□□□□□ -0.15
Nop53Q8BK35 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.12□□□□□ -0.15
Nop53Q8BK35 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.12□□□□□ -0.15
Nop53Q8BK35 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.12□□□□□ -0.15
Nop53Q8BK35 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nop53Q8BK35 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms