Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Gm8099-201ENSMUST00000200510 742 ntBASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcal1Q8BJL0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Gm26956-201ENSMUST00000182176 986 ntBASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcal1Q8BJL0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Snord83b-201ENSMUST00000104546 94 ntBASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Gm12502-201ENSMUST00000120197 444 ntBASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcal1Q8BJL0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcal1Q8BJL0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms