Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2bQ8BJF9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Gm9522-201ENSMUST00000182394 926 ntBASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chmp2bQ8BJF9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms