Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm15678-201ENSMUST00000117573 960 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm19078-201ENSMUST00000206311 727 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm45384-201ENSMUST00000210451 277 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm5186-201ENSMUST00000218781 920 ntBASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Samm50Q8BGH2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Gm12485-201ENSMUST00000119641 291 ntBASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Mir7654-201ENSMUST00000185082 70 ntBASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Samm50Q8BGH2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Gm11478-201ENSMUST00000117851 599 ntBASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Samm50Q8BGH2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms