Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.21□□□□□ -0.29
Usp8Q80U87 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Gm29667-201ENSMUST00000190817 490 ntBASIC13.21□□□□□ -0.29
Usp8Q80U87 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.21□□□□□ -0.29
Usp8Q80U87 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp8Q80U87 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp8Q80U87 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp8Q80U87 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.21□□□□□ -0.3
Usp8Q80U87 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp8Q80U87 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Usp8Q80U87 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.21□□□□□ -0.3
Usp8Q80U87 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.2□□□□□ -0.3
Usp8Q80U87 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm12151-201ENSMUST00000121374 290 ntBASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.2□□□□□ -0.3
Usp8Q80U87 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm17330-201ENSMUST00000221047 165 ntBASIC13.2□□□□□ -0.3
Usp8Q80U87 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp8Q80U87 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Usp8Q80U87 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp8Q80U87 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp8Q80U87 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Usp8Q80U87 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Usp8Q80U87 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms