Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Olfr284-202ENSMUST00000206647 966 ntBASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.19□□□□□ -0.46
Pif1Q80SX8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.19□□□□□ -0.46
Pif1Q80SX8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.19□□□□□ -0.46
Pif1Q80SX8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm8805-201ENSMUST00000117848 313 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm12241-201ENSMUST00000118330 726 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm13123-201ENSMUST00000122173 492 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm16379-201ENSMUST00000161469 348 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm8762-201ENSMUST00000193486 339 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm43758-201ENSMUST00000199500 367 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm10608-202ENSMUST00000213924 676 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.18□□□□□ -0.46
Pif1Q80SX8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pif1Q80SX8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms