Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Vma21Q78T54 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Vma21Q78T54 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm23935-201ENSMUST00000102303 57 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm24270-201ENSMUST00000102326 57 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm12485-201ENSMUST00000119641 291 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm24245-201ENSMUST00000157318 57 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm37935-201ENSMUST00000192012 982 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm7775-201ENSMUST00000218871 853 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 Gm9063-201ENSMUST00000223299 582 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.71□□□□□ -0.69
Vma21Q78T54 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Vma21Q78T54 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Vma21Q78T54 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Vma21Q78T54 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Vma21Q78T54 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Vma21Q78T54 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Vma21Q78T54 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
Vma21Q78T54 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Vma21Q78T54 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vma21Q78T54 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.7□□□□□ -0.7
Vma21Q78T54 Gm13616-201ENSMUST00000120600 222 ntBASIC10.7□□□□□ -0.7
Vma21Q78T54 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.7□□□□□ -0.7
Vma21Q78T54 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms