Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim12Q78RX3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim12Q78RX3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim12Q78RX3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim12Q78RX3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim12Q78RX3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim12Q78RX3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Smim12Q78RX3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gm11524-201ENSMUST00000119349 807 ntBASIC11.08□□□□□ -0.64
Smim12Q78RX3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gm26464-201ENSMUST00000157094 305 ntBASIC11.08□□□□□ -0.64
Smim12Q78RX3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.08□□□□□ -0.64
Smim12Q78RX3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.08□□□□□ -0.64
Smim12Q78RX3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim12Q78RX3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.07□□□□□ -0.64
Smim12Q78RX3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm6736-201ENSMUST00000166583 948 ntBASIC11.07□□□□□ -0.64
Smim12Q78RX3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm17837-201ENSMUST00000186435 985 ntBASIC11.07□□□□□ -0.64
Smim12Q78RX3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm19078-201ENSMUST00000206311 727 ntBASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.07□□□□□ -0.64
Smim12Q78RX3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.07□□□□□ -0.64
Smim12Q78RX3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smim12Q78RX3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms