Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubfd1Q78JW9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm15198-201ENSMUST00000117283 177 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubfd1Q78JW9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.79□□□□□ -0.36
Ubfd1Q78JW9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms