Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gm43378-201ENSMUST00000199336 582 ntBASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm45224-201ENSMUST00000208203 414 ntBASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm45925-201ENSMUST00000218882 744 ntBASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx55Q6ZPL9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Mir7221-201ENSMUST00000184009 72 ntBASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms