Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Gm7029-201ENSMUST00000173226 450 ntBASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Gm19184-201ENSMUST00000196798 928 ntBASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Gm6013-201ENSMUST00000212264 699 ntBASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd1Q6PIP5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Rubie-203ENSMUST00000227803 2430 ntBASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nudcd1Q6PIP5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nudcd1Q6PIP5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.24□□□□□ -0.29
Nudcd1Q6PIP5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nudcd1Q6PIP5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nudcd1Q6PIP5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nudcd1Q6PIP5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nudcd1Q6PIP5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms