Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm16505-201ENSMUST00000179981 232 ntBASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Rprl1-202ENSMUST00000198476 238 ntBASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm8913-201ENSMUST00000209491 641 ntBASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nup98Q6PFD9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm14277-201ENSMUST00000121195 360 ntBASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Mir3102-201ENSMUST00000175555 104 ntBASIC15.22■□□□□ 0.03
Nup98Q6PFD9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup98Q6PFD9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Gm42937-201ENSMUST00000197360 752 ntBASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms