Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Gm19931-201ENSMUST00000198920 368 ntBASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sp140Q6NSQ5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm15371-201ENSMUST00000117057 784 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm15429-201ENSMUST00000151268 798 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm5866-201ENSMUST00000177881 973 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm44397-201ENSMUST00000195950 113 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sp140Q6NSQ5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sp140Q6NSQ5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms