Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Krt39Q6IFX4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Gm14719-201ENSMUST00000121891 340 ntBASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Gm26464-201ENSMUST00000157094 305 ntBASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt39Q6IFX4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.52□□□□□ -0.08
Krt39Q6IFX4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.52□□□□□ -0.08
Krt39Q6IFX4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt39Q6IFX4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Gm38144-201ENSMUST00000192790 465 ntBASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Gm19078-201ENSMUST00000206311 727 ntBASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Krt39Q6IFX4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms