Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Mir6420-201ENSMUST00000185032 102 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm43630-201ENSMUST00000201550 776 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm6266-201ENSMUST00000203844 806 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm43435-201ENSMUST00000199996 1438 ntBASIC13.9□□□□□ -0.19
Scube3Q66PY1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.89□□□□□ -0.19
Scube3Q66PY1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.89□□□□□ -0.19
Scube3Q66PY1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm28925-201ENSMUST00000188586 168 ntBASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm29747-201ENSMUST00000194764 585 ntBASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.89□□□□□ -0.19
Scube3Q66PY1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube3Q66PY1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm16202-201ENSMUST00000117532 544 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm24644-201ENSMUST00000157114 139 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm38170-201ENSMUST00000195404 816 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm43066-201ENSMUST00000199589 1260 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms