Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.94□□□□□ -0.34
VclQ64727 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.94□□□□□ -0.34
VclQ64727 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VclQ64727 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.94□□□□□ -0.34
VclQ64727 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.94□□□□□ -0.34
VclQ64727 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.94□□□□□ -0.34
VclQ64727 Gm8598-201ENSMUST00000221184 836 ntBASIC12.94□□□□□ -0.34
VclQ64727 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.94□□□□□ -0.34
VclQ64727 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.94□□□□□ -0.34
VclQ64727 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Gm6091-201ENSMUST00000098307 165 ntBASIC12.94□□□□□ -0.34
VclQ64727 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VclQ64727 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.94□□□□□ -0.34
VclQ64727 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.94□□□□□ -0.34
VclQ64727 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VclQ64727 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VclQ64727 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.94□□□□□ -0.34
VclQ64727 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VclQ64727 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.93□□□□□ -0.34
VclQ64727 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VclQ64727 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VclQ64727 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.93□□□□□ -0.34
VclQ64727 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Gm12390-201ENSMUST00000117897 397 ntBASIC12.93□□□□□ -0.34
VclQ64727 Gm11618-201ENSMUST00000117946 267 ntBASIC12.93□□□□□ -0.34
VclQ64727 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.93□□□□□ -0.34
VclQ64727 Gm6447-201ENSMUST00000118905 835 ntBASIC12.93□□□□□ -0.34
VclQ64727 Gm11803-201ENSMUST00000119966 444 ntBASIC12.93□□□□□ -0.34
VclQ64727 Gm22331-201ENSMUST00000158066 136 ntBASIC12.93□□□□□ -0.34
VclQ64727 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VclQ64727 Gm8810-201ENSMUST00000172895 754 ntBASIC12.93□□□□□ -0.34
VclQ64727 Proscos-202ENSMUST00000178990 666 ntBASIC12.93□□□□□ -0.34
VclQ64727 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.93□□□□□ -0.34
VclQ64727 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.93□□□□□ -0.34
VclQ64727 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.93□□□□□ -0.34
VclQ64727 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VclQ64727 Gm7561-201ENSMUST00000211203 886 ntBASIC12.93□□□□□ -0.34
VclQ64727 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.93□□□□□ -0.34
VclQ64727 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VclQ64727 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
VclQ64727 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.93□□□□□ -0.34
VclQ64727 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.93□□□□□ -0.34
VclQ64727 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VclQ64727 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.92□□□□□ -0.34
VclQ64727 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.92□□□□□ -0.34
VclQ64727 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Gm14350-201ENSMUST00000116642 640 ntBASIC12.92□□□□□ -0.34
VclQ64727 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.92□□□□□ -0.34
VclQ64727 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms