Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sdc3Q64519 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Sdc3Q64519 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Proscos-202ENSMUST00000178990 666 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm38144-201ENSMUST00000192790 465 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sdc3Q64519 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sdc3Q64519 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm22331-201ENSMUST00000158066 136 ntBASIC12.66□□□□□ -0.38
Sdc3Q64519 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm29649-201ENSMUST00000185649 419 ntBASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Sdc3Q64519 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.66□□□□□ -0.38
Sdc3Q64519 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms