Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.13□□□□□ -0.47
AtmQ62388 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.13□□□□□ -0.47
AtmQ62388 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AtmQ62388 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.13□□□□□ -0.47
AtmQ62388 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AtmQ62388 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
AtmQ62388 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AtmQ62388 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
AtmQ62388 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.12□□□□□ -0.47
AtmQ62388 Gm6963-201ENSMUST00000147879 379 ntBASIC12.12□□□□□ -0.47
AtmQ62388 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.12□□□□□ -0.47
AtmQ62388 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.12□□□□□ -0.47
AtmQ62388 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.12□□□□□ -0.47
AtmQ62388 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.12□□□□□ -0.47
AtmQ62388 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
AtmQ62388 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
AtmQ62388 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.12□□□□□ -0.47
AtmQ62388 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.12□□□□□ -0.47
AtmQ62388 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.12□□□□□ -0.47
AtmQ62388 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
AtmQ62388 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.12□□□□□ -0.47
AtmQ62388 Gm44329-201ENSMUST00000197469 112 ntBASIC12.12□□□□□ -0.47
AtmQ62388 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AtmQ62388 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AtmQ62388 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.11□□□□□ -0.47
AtmQ62388 Gm45527-201ENSMUST00000211052 774 ntBASIC12.11□□□□□ -0.47
AtmQ62388 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms