Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.72□□□□□ -0.85
Ss18Q62280 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ss18Q62280 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ss18Q62280 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.71□□□□□ -0.85
Ss18Q62280 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ss18Q62280 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ss18Q62280 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Ss18Q62280 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ss18Q62280 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ss18Q62280 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm15920-201ENSMUST00000118998 402 ntBASIC9.71□□□□□ -0.86
Ss18Q62280 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.71□□□□□ -0.86
Ss18Q62280 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.71□□□□□ -0.86
Ss18Q62280 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm27618-201ENSMUST00000183671 60 ntBASIC9.71□□□□□ -0.86
Ss18Q62280 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm18905-201ENSMUST00000205454 928 ntBASIC9.71□□□□□ -0.86
Ss18Q62280 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.71□□□□□ -0.86
Ss18Q62280 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.71□□□□□ -0.86
Ss18Q62280 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.71□□□□□ -0.86
Ss18Q62280 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.71□□□□□ -0.86
Ss18Q62280 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.71□□□□□ -0.86
Ss18Q62280 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.71□□□□□ -0.86
Ss18Q62280 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ss18Q62280 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ss18Q62280 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.86
Ss18Q62280 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ss18Q62280 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ss18Q62280 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 Mir6956-201ENSMUST00000183598 62 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Gm44872-201ENSMUST00000207864 420 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.7□□□□□ -0.86
Ss18Q62280 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.7□□□□□ -0.86
Ss18Q62280 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms