Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd47Q61735 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.04□□□□□ -0.48
Cd47Q61735 Gm12151-201ENSMUST00000121374 290 ntBASIC12.04□□□□□ -0.48
Cd47Q61735 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd47Q61735 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd47Q61735 Gm21854-201ENSMUST00000179901 471 ntBASIC12.04□□□□□ -0.48
Cd47Q61735 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd47Q61735 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.04□□□□□ -0.48
Cd47Q61735 Syt7-205ENSMUST00000224135 1557 ntBASIC12.04□□□□□ -0.48
Cd47Q61735 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd47Q61735 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd47Q61735 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.04□□□□□ -0.48
Cd47Q61735 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd47Q61735 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm29667-201ENSMUST00000190817 490 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 Gm42660-201ENSMUST00000197733 947 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm17330-201ENSMUST00000221047 165 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm20445-201ENSMUST00000061905 565 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cd47Q61735 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.03□□□□□ -0.48
Cd47Q61735 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd47Q61735 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd47Q61735 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.02□□□□□ -0.48
Cd47Q61735 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd47Q61735 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cd47Q61735 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.02□□□□□ -0.49
Cd47Q61735 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.02□□□□□ -0.49
Cd47Q61735 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd47Q61735 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 Gm27838-201ENSMUST00000184829 128 ntBASIC12.02□□□□□ -0.49
Cd47Q61735 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.02□□□□□ -0.49
Cd47Q61735 Gm18515-201ENSMUST00000219755 797 ntBASIC12.02□□□□□ -0.49
Cd47Q61735 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.02□□□□□ -0.49
Cd47Q61735 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd47Q61735 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cd47Q61735 Gm5867-201ENSMUST00000063197 592 ntBASIC12.02□□□□□ -0.49
Cd47Q61735 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cd47Q61735 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms