Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 CT030653.1-201ENSMUST00000224382 1279 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Gli3Q61602 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gli3Q61602 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.23■□□□□ 0.35
Gli3Q61602 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gli3Q61602 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gli3Q61602 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gli3Q61602 Gm42511-201ENSMUST00000196160 234 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.22■□□□□ 0.35
Gli3Q61602 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Gli3Q61602 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Gli3Q61602 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Gm44270-201ENSMUST00000203084 1234 ntBASIC17.22■□□□□ 0.35
Gli3Q61602 Gm45594-201ENSMUST00000211717 241 ntBASIC17.22■□□□□ 0.35
Gli3Q61602 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gli3Q61602 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.22■□□□□ 0.35
Gli3Q61602 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.22■□□□□ 0.35
Gli3Q61602 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gli3Q61602 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.21■□□□□ 0.35
Gli3Q61602 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gli3Q61602 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC17.21■□□□□ 0.35
Gli3Q61602 Gm3551-201ENSMUST00000190750 664 ntBASIC17.21■□□□□ 0.35
Gli3Q61602 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gli3Q61602 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gli3Q61602 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gli3Q61602 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gli3Q61602 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gli3Q61602 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Gli3Q61602 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Gli3Q61602 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Gm12579-201ENSMUST00000118040 783 ntBASIC17.2■□□□□ 0.34
Gli3Q61602 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC17.2■□□□□ 0.34
Gli3Q61602 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC17.2■□□□□ 0.34
Gli3Q61602 AC166344.1-201ENSMUST00000223745 674 ntBASIC17.2■□□□□ 0.34
Gli3Q61602 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gli3Q61602 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.2■□□□□ 0.34
Gli3Q61602 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Gli3Q61602 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms