Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Vsx2Q61412 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.83□□□□□ -0.35
Vsx2Q61412 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.83□□□□□ -0.36
Vsx2Q61412 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.83□□□□□ -0.36
Vsx2Q61412 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx2Q61412 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Gm2495-201ENSMUST00000191160 466 ntBASIC12.83□□□□□ -0.36
Vsx2Q61412 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx2Q61412 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.83□□□□□ -0.36
Vsx2Q61412 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.83□□□□□ -0.36
Vsx2Q61412 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vsx2Q61412 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx2Q61412 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.83□□□□□ -0.36
Vsx2Q61412 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.83□□□□□ -0.36
Vsx2Q61412 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vsx2Q61412 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx2Q61412 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx2Q61412 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.82□□□□□ -0.36
Vsx2Q61412 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vsx2Q61412 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm12928-201ENSMUST00000117115 573 ntBASIC12.82□□□□□ -0.36
Vsx2Q61412 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.82□□□□□ -0.36
Vsx2Q61412 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx2Q61412 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vsx2Q61412 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm29608-201ENSMUST00000190444 463 ntBASIC12.82□□□□□ -0.36
Vsx2Q61412 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.82□□□□□ -0.36
Vsx2Q61412 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx2Q61412 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.82□□□□□ -0.36
Vsx2Q61412 Gm5356-201ENSMUST00000093326 615 ntBASIC12.82□□□□□ -0.36
Vsx2Q61412 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx2Q61412 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm12403-201ENSMUST00000121384 959 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms