Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.64□□□□□ -0.39
ClpbQ60649 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.64□□□□□ -0.39
ClpbQ60649 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.64□□□□□ -0.39
ClpbQ60649 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClpbQ60649 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ClpbQ60649 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
ClpbQ60649 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.63□□□□□ -0.39
ClpbQ60649 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
ClpbQ60649 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.63□□□□□ -0.39
ClpbQ60649 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.63□□□□□ -0.39
ClpbQ60649 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ClpbQ60649 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gm27486-201ENSMUST00000184923 80 ntBASIC12.63□□□□□ -0.39
ClpbQ60649 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.63□□□□□ -0.39
ClpbQ60649 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.63□□□□□ -0.39
ClpbQ60649 Gm8463-201ENSMUST00000208573 613 ntBASIC12.63□□□□□ -0.39
ClpbQ60649 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gm5035-201ENSMUST00000215581 927 ntBASIC12.63□□□□□ -0.39
ClpbQ60649 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.63□□□□□ -0.39
ClpbQ60649 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ClpbQ60649 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ClpbQ60649 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.63□□□□□ -0.39
ClpbQ60649 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
ClpbQ60649 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ClpbQ60649 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClpbQ60649 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ClpbQ60649 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.62□□□□□ -0.39
ClpbQ60649 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.62□□□□□ -0.39
ClpbQ60649 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.62□□□□□ -0.39
ClpbQ60649 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms