Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.56□□□□□ -0.4
Nr1h4Q60641 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm14767-201ENSMUST00000121559 586 ntBASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm27321-201ENSMUST00000185021 205 ntBASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm43514-201ENSMUST00000198852 424 ntBASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm43703-201ENSMUST00000200523 763 ntBASIC12.56□□□□□ -0.4
Nr1h4Q60641 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.56□□□□□ -0.4
Nr1h4Q60641 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Nr1h4Q60641 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.55□□□□□ -0.4
Nr1h4Q60641 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.55□□□□□ -0.4
Nr1h4Q60641 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gm14822-201ENSMUST00000122247 291 ntBASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.55□□□□□ -0.4
Nr1h4Q60641 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nr1h4Q60641 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nr1h4Q60641 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nr1h4Q60641 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nr1h4Q60641 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nr1h4Q60641 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.54□□□□□ -0.4
Nr1h4Q60641 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms