Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.54□□□□□ -0.56
Vmn1r223Q5SSA0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Gm4875-201ENSMUST00000118257 786 ntBASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Gm15487-201ENSMUST00000122373 465 ntBASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Vmn1r223Q5SSA0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Vmn1r223Q5SSA0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Gm5866-201ENSMUST00000177881 973 ntBASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Gm24694-201ENSMUST00000180054 110 ntBASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Gm27663-201ENSMUST00000184839 110 ntBASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Syt7-204ENSMUST00000223586 1344 ntBASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vmn1r223Q5SSA0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms