Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Mospd4-201ENSMUST00000180618 576 ntBASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm18212-201ENSMUST00000211678 889 ntBASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm9083-201ENSMUST00000120423 819 ntBASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm14017-201ENSMUST00000121934 386 ntBASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm32025-201ENSMUST00000217960 307 ntBASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm19163-201ENSMUST00000223313 780 ntBASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm15276-201ENSMUST00000145953 498 ntBASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc88aQ5SNZ0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Ccdc88aQ5SNZ0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc88aQ5SNZ0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms