Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Gm22189-201ENSMUST00000103822 86 ntBASIC13.01□□□□□ -0.33
Scn2bQ56A07 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.01□□□□□ -0.33
Scn2bQ56A07 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Scn2bQ56A07 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn2bQ56A07 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13□□□□□ -0.33
Scn2bQ56A07 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scn2bQ56A07 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scn2bQ56A07 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scn2bQ56A07 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm45643-201ENSMUST00000211364 1484 ntBASIC13□□□□□ -0.33
Scn2bQ56A07 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Scn2bQ56A07 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm15376-201ENSMUST00000122258 783 ntBASIC13□□□□□ -0.33
Scn2bQ56A07 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Scn2bQ56A07 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Scn2bQ56A07 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13□□□□□ -0.33
Scn2bQ56A07 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13□□□□□ -0.33
Scn2bQ56A07 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13□□□□□ -0.33
Scn2bQ56A07 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scn2bQ56A07 Gm19220-201ENSMUST00000222682 803 ntBASIC13□□□□□ -0.33
Scn2bQ56A07 AC154687.2-201ENSMUST00000223853 640 ntBASIC13□□□□□ -0.33
Scn2bQ56A07 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn2bQ56A07 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn2bQ56A07 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn2bQ56A07 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn2bQ56A07 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn2bQ56A07 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn2bQ56A07 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn2bQ56A07 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn2bQ56A07 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms