Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tmem40Q4FJU9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Proscos-202ENSMUST00000178990 666 ntBASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm38266-201ENSMUST00000194931 421 ntBASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm3961-201ENSMUST00000204425 994 ntBASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm17917-201ENSMUST00000218561 953 ntBASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tmem40Q4FJU9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.28□□□□□ -0.6
Tmem40Q4FJU9 Gm1335-201ENSMUST00000121653 386 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms