Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm24158-201ENSMUST00000175263 71 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm27525-201ENSMUST00000184465 107 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm18766-201ENSMUST00000189811 808 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 AW822252-206ENSMUST00000208904 237 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim40Q3UWA4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Gm15770-201ENSMUST00000117498 584 ntBASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms