Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upf3aQ3ULJ3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Gm14704-201ENSMUST00000120300 874 ntBASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upf3aQ3ULJ3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Upf3aQ3ULJ3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upf3aQ3ULJ3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upf3aQ3ULJ3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.77□□□□□ -0.2
Upf3aQ3ULJ3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upf3aQ3ULJ3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm16505-201ENSMUST00000179981 232 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm45186-201ENSMUST00000206874 478 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms