Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm13492-201ENSMUST00000119772 665 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm14585-201ENSMUST00000120713 634 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm25881-201ENSMUST00000157783 103 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Spg11Q3UHA3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm18201-201ENSMUST00000174735 875 ntBASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm38092-201ENSMUST00000195600 653 ntBASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm14704-201ENSMUST00000120300 874 ntBASIC11.98□□□□□ -0.49
Spg11Q3UHA3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Spg11Q3UHA3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm4726-201ENSMUST00000135604 736 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm6019-201ENSMUST00000148369 736 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm6485-201ENSMUST00000160676 439 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms