Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm8927-201ENSMUST00000181978 981 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Mir8102-201ENSMUST00000184148 139 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm27989-201ENSMUST00000184721 107 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm44719-201ENSMUST00000206404 149 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm3222-201ENSMUST00000071282 990 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Gm4875-201ENSMUST00000118257 786 ntBASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Gm13385-201ENSMUST00000121089 220 ntBASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Gm10766-202ENSMUST00000194123 606 ntBASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.22□□□□□ -0.61
Fndc4Q3TR08 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Fndc4Q3TR08 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms