Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm37489-201ENSMUST00000191883 159 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm44364-201ENSMUST00000198368 141 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm10608-202ENSMUST00000213924 676 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.59□□□□□ -0.39
Hoxc4Q08624 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm13492-201ENSMUST00000119772 665 ntBASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm7783-201ENSMUST00000204795 781 ntBASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm45865-201ENSMUST00000211815 945 ntBASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm21769-201ENSMUST00000211922 111 ntBASIC12.59□□□□□ -0.39
Hoxc4Q08624 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc4Q08624 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.58□□□□□ -0.39
Hoxc4Q08624 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc4Q08624 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc4Q08624 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Hoxc4Q08624 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc4Q08624 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc4Q08624 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm15370-201ENSMUST00000117158 253 ntBASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm11222-201ENSMUST00000119005 738 ntBASIC12.58□□□□□ -0.4
Hoxc4Q08624 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm38092-201ENSMUST00000195600 653 ntBASIC12.58□□□□□ -0.4
Hoxc4Q08624 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Morn2-202ENSMUST00000227729 656 ntBASIC12.58□□□□□ -0.4
Hoxc4Q08624 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm24526-201ENSMUST00000082921 158 ntBASIC12.58□□□□□ -0.4
Hoxc4Q08624 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms