Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.95□□□□□ -0.66
Tff1Q08423 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.95□□□□□ -0.66
Tff1Q08423 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tff1Q08423 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.94□□□□□ -0.66
Tff1Q08423 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.94□□□□□ -0.66
Tff1Q08423 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.94□□□□□ -0.66
Tff1Q08423 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tff1Q08423 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Tff1Q08423 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.94□□□□□ -0.66
Tff1Q08423 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.94□□□□□ -0.66
Tff1Q08423 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.94□□□□□ -0.66
Tff1Q08423 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm10766-202ENSMUST00000194123 606 ntBASIC10.94□□□□□ -0.66
Tff1Q08423 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.94□□□□□ -0.66
Tff1Q08423 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Tff1Q08423 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.94□□□□□ -0.66
Tff1Q08423 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.94□□□□□ -0.66
Tff1Q08423 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Tff1Q08423 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tff1Q08423 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.93□□□□□ -0.66
Tff1Q08423 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.93□□□□□ -0.66
Tff1Q08423 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.93□□□□□ -0.66
Tff1Q08423 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.93□□□□□ -0.66
Tff1Q08423 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms