Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox4Q06831 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.94□□□□□ -0.34
Sox4Q06831 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.94□□□□□ -0.34
Sox4Q06831 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox4Q06831 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox4Q06831 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox4Q06831 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox4Q06831 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.93□□□□□ -0.34
Sox4Q06831 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Sox4Q06831 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox4Q06831 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox4Q06831 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Gm37497-201ENSMUST00000195830 798 ntBASIC12.93□□□□□ -0.34
Sox4Q06831 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox4Q06831 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.93□□□□□ -0.34
Sox4Q06831 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox4Q06831 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.93□□□□□ -0.34
Sox4Q06831 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Sox4Q06831 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox4Q06831 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox4Q06831 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.92□□□□□ -0.34
Sox4Q06831 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox4Q06831 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox4Q06831 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Sox4Q06831 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox4Q06831 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox4Q06831 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox4Q06831 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox4Q06831 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Sox4Q06831 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Gm16177-201ENSMUST00000120728 718 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Gm11978-201ENSMUST00000122315 466 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Sox4Q06831 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Gm4271-201ENSMUST00000174444 973 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Gm6458-201ENSMUST00000211573 635 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Gm40466-201ENSMUST00000212174 422 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Gm10146-201ENSMUST00000072739 309 ntBASIC12.92□□□□□ -0.34
Sox4Q06831 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox4Q06831 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox4Q06831 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms