Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Gm14726-201ENSMUST00000120623 896 ntBASIC16.34■□□□□ 0.21
Col1a2Q01149 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Col1a2Q01149 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.34■□□□□ 0.21
Col1a2Q01149 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Gm5904-201ENSMUST00000210286 865 ntBASIC16.34■□□□□ 0.21
Col1a2Q01149 Gm5950-201ENSMUST00000213337 772 ntBASIC16.34■□□□□ 0.21
Col1a2Q01149 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.34■□□□□ 0.21
Col1a2Q01149 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.34■□□□□ 0.21
Col1a2Q01149 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col1a2Q01149 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col1a2Q01149 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col1a2Q01149 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col1a2Q01149 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col1a2Q01149 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col1a2Q01149 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.33■□□□□ 0.2
Col1a2Q01149 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.33■□□□□ 0.2
Col1a2Q01149 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.33■□□□□ 0.2
Col1a2Q01149 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.33■□□□□ 0.2
Col1a2Q01149 Gm6082-201ENSMUST00000215204 454 ntBASIC16.33■□□□□ 0.2
Col1a2Q01149 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.33■□□□□ 0.2
Col1a2Q01149 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.33■□□□□ 0.2
Col1a2Q01149 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.33■□□□□ 0.2
Col1a2Q01149 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col1a2Q01149 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col1a2Q01149 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.32■□□□□ 0.2
Col1a2Q01149 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Col1a2Q01149 Gm13736-201ENSMUST00000119272 253 ntBASIC16.32■□□□□ 0.2
Col1a2Q01149 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.32■□□□□ 0.2
Col1a2Q01149 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col1a2Q01149 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col1a2Q01149 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.31■□□□□ 0.2
Col1a2Q01149 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.31■□□□□ 0.2
Col1a2Q01149 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Mir877-201ENSMUST00000104738 85 ntBASIC16.31■□□□□ 0.2
Col1a2Q01149 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.31■□□□□ 0.2
Col1a2Q01149 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Col1a2Q01149 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Col1a2Q01149 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col1a2Q01149 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms