Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
GabpaQ00422 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.88□□□□□ -0.03
GabpaQ00422 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.88□□□□□ -0.03
GabpaQ00422 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.88□□□□□ -0.03
GabpaQ00422 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GabpaQ00422 Gm37489-201ENSMUST00000191883 159 ntBASIC14.88□□□□□ -0.03
GabpaQ00422 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.88□□□□□ -0.03
GabpaQ00422 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GabpaQ00422 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GabpaQ00422 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.87□□□□□ -0.03
GabpaQ00422 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.87□□□□□ -0.03
GabpaQ00422 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.87□□□□□ -0.03
GabpaQ00422 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Morn2-202ENSMUST00000227729 656 ntBASIC14.87□□□□□ -0.03
GabpaQ00422 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
GabpaQ00422 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
GabpaQ00422 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GabpaQ00422 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GabpaQ00422 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GabpaQ00422 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
GabpaQ00422 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
GabpaQ00422 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.86□□□□□ -0.03
GabpaQ00422 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.86□□□□□ -0.03
GabpaQ00422 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GabpaQ00422 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.86□□□□□ -0.03
GabpaQ00422 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.86□□□□□ -0.03
GabpaQ00422 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
GabpaQ00422 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.85□□□□□ -0.03
GabpaQ00422 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms