Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 n-R5s64-201ENSMUST00000102019 119 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Gm22920-201ENSMUST00000102175 109 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm11989-201ENSMUST00000117240 672 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Gm11362-201ENSMUST00000118838 850 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Gm13263-201ENSMUST00000121271 838 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC8.67□□□□□ -1.02
PrkdcP97313 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
PrkdcP97313 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC8.67□□□□□ -1.02
PrkdcP97313 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm12623-201ENSMUST00000119849 1983 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 AC138716.2-201ENSMUST00000226670 1016 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 AC130477.1-201ENSMUST00000226982 420 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
PrkdcP97313 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm9072-201ENSMUST00000218390 1514 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
PrkdcP97313 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 AC129308.3-201ENSMUST00000225652 524 ntBASIC8.67□□□□□ -1.02
PrkdcP97313 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC8.67□□□□□ -1.02
PrkdcP97313 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
PrkdcP97313 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm5641-201ENSMUST00000091130 1488 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm10710-201ENSMUST00000047876 3971 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 AC153962.2-201ENSMUST00000219417 550 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC8.66□□□□□ -1.02
PrkdcP97313 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm23085-201ENSMUST00000157849 293 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm18514-201ENSMUST00000218980 436 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gng5-ps-201ENSMUST00000120931 205 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC8.66□□□□□ -1.02
PrkdcP97313 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm4775-201ENSMUST00000169588 402 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm8100-201ENSMUST00000182906 988 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
PrkdcP97313 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PrkdcP97313 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC8.66□□□□□ -1.02
PrkdcP97313 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PrkdcP97313 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm14213-201ENSMUST00000119778 768 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm19587-201ENSMUST00000191395 545 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Gm9645-201ENSMUST00000197131 792 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC8.65□□□□□ -1.02
PrkdcP97313 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms