Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.54□□□□□ -0.24
Trim43bP86448 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim43bP86448 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim43bP86448 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim43bP86448 Mir874-201ENSMUST00000104769 76 ntBASIC13.54□□□□□ -0.24
Trim43bP86448 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim43bP86448 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim43bP86448 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim43bP86448 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.54□□□□□ -0.24
Trim43bP86448 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim43bP86448 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim43bP86448 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim43bP86448 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim43bP86448 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43bP86448 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim43bP86448 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim43bP86448 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trim43bP86448 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim43bP86448 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim43bP86448 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43bP86448 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43bP86448 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim43bP86448 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43bP86448 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim43bP86448 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim43bP86448 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trim43bP86448 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.52□□□□□ -0.25
Trim43bP86448 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim43bP86448 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trim43bP86448 Gm18905-201ENSMUST00000205454 928 ntBASIC13.52□□□□□ -0.25
Trim43bP86448 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms