Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dupd1-202ENSMUST00000224735 548 ntBASIC12.98□□□□□ -0.33
Shox2P70390 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.98□□□□□ -0.33
Shox2P70390 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.98□□□□□ -0.33
Shox2P70390 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Shox2P70390 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.98□□□□□ -0.33
Shox2P70390 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Shox2P70390 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Shox2P70390 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.97□□□□□ -0.33
Shox2P70390 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Gm33320-201ENSMUST00000192232 530 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Gm44492-201ENSMUST00000197012 141 ntBASIC12.97□□□□□ -0.33
Shox2P70390 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Gm18057-201ENSMUST00000208220 503 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.97□□□□□ -0.33
Shox2P70390 Gm5867-201ENSMUST00000063197 592 ntBASIC12.97□□□□□ -0.33
Shox2P70390 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Shox2P70390 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.97□□□□□ -0.33
Shox2P70390 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shox2P70390 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Shox2P70390 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shox2P70390 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.96□□□□□ -0.33
Shox2P70390 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.96□□□□□ -0.33
Shox2P70390 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.96□□□□□ -0.33
Shox2P70390 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Shox2P70390 Gm5566-201ENSMUST00000116118 459 ntBASIC12.96□□□□□ -0.33
Shox2P70390 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.96□□□□□ -0.33
Shox2P70390 Gm19184-201ENSMUST00000196798 928 ntBASIC12.96□□□□□ -0.33
Shox2P70390 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.96□□□□□ -0.33
Shox2P70390 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.96□□□□□ -0.33
Shox2P70390 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.96□□□□□ -0.33
Shox2P70390 Gm17330-201ENSMUST00000221047 165 ntBASIC12.96□□□□□ -0.33
Shox2P70390 Gm16476-201ENSMUST00000221544 139 ntBASIC12.96□□□□□ -0.33
Shox2P70390 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Map1b-203ENSMUST00000223725 2669 ntBASIC12.96□□□□□ -0.33
Shox2P70390 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shox2P70390 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shox2P70390 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms