Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Msx3P70354 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Msx3P70354 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Msx3P70354 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Msx3P70354 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Msx3P70354 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.52□□□□□ -0.25
Msx3P70354 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Msx3P70354 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.52□□□□□ -0.25
Msx3P70354 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Msx3P70354 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Msx3P70354 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.52□□□□□ -0.25
Msx3P70354 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Msx3P70354 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.52□□□□□ -0.25
Msx3P70354 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Msx3P70354 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msx3P70354 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Msx3P70354 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Msx3P70354 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Msx3P70354 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.51□□□□□ -0.25
Msx3P70354 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Msx3P70354 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Msx3P70354 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Msx3P70354 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.5□□□□□ -0.25
Msx3P70354 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Msx3P70354 Gm10576-201ENSMUST00000191927 825 ntBASIC13.5□□□□□ -0.25
Msx3P70354 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.5□□□□□ -0.25
Msx3P70354 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.5□□□□□ -0.25
Msx3P70354 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.5□□□□□ -0.25
Msx3P70354 Gm18473-201ENSMUST00000220543 868 ntBASIC13.5□□□□□ -0.25
Msx3P70354 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.5□□□□□ -0.25
Msx3P70354 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Gm2423-201ENSMUST00000074863 733 ntBASIC13.5□□□□□ -0.25
Msx3P70354 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.5□□□□□ -0.25
Msx3P70354 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.5□□□□□ -0.25
Msx3P70354 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx3P70354 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.5□□□□□ -0.25
Msx3P70354 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Msx3P70354 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms